hmgi1 vaginal introitus (Collection)

Subset Collection:

hmgi1

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:The collection contains gene index files generated by running gene predictions and annotations on assemblies from individual vaginal_introitus sample reads, after quality control screening. Gene sequence and annotation is provided in gff3 format, nucleotide and protein sequences in multi-FASTA format. Functional attributes assigned to each gene prediction include gene name, gene symbol, Gene Ontology (GO) assignments and Enzyme Commission (EC) numbers.

Abbreviation:hmgi1_vaginal_introitus

Results found

Linked to

	Label	Description
	SRS014465.with fasta.gff3.bz2 File (Entity type)	A 1.37 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	HHS 763577454 Subject (Entity type)	A subject produced as part of the HHS project
	SRS062752 nucleotide.fasta.bz2 File (Entity type)	A 679 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS014465 nucleotide.fasta.bz2 File (Entity type)	A 680 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS062752.with fasta.gff3.bz2 File (Entity type)	A 1.35 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS014465 aa.fasta.bz2 File (Entity type)	A 443 KB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 764042746 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	SRS015071 nucleotide.fasta.bz2 File (Entity type)	A 589 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS014465 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project

SRS014465.with fasta.gff3.bz2

File (Entity type)

A 1.37 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

HHS 763577454

Subject (Entity type)

A subject produced as part of the HHS project

SRS062752 nucleotide.fasta.bz2

File (Entity type)

A 679 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS014465 nucleotide.fasta.bz2

File (Entity type)

A 680 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS062752.with fasta.gff3.bz2

File (Entity type)

A 1.35 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS014465 aa.fasta.bz2

File (Entity type)

A 443 KB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 764042746

Subject (Entity type)

A subject from HMP produced as part of the HHS project

SRS015071 nucleotide.fasta.bz2

File (Entity type)

A 589 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS014465

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.