hmbsa1 attached keratinized gingiva (Collection)

Subset Collection:

hmbsa1

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:Reads that were not assembled as part of the whole metagenome SOAPdenovo-based assembly approach (available in the collection - hmasm1) were organized and assembled by body site usingSOAPdenovo to generate the attached keratinized gingiva-specific assemblies.

Abbreviation:hmbsa1_attached_keratinized_gingiva

Results found

Linked to

	Label	Description
	SRS013946 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	HHS 763577454 Subject (Entity type)	A subject produced as part of the HHS project
	Keratinized gingiva.tar.bz2 File (Entity type)	A 14.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS019125 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	SRS014687 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	SRS019025 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	SRS014473 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	hmbsa1 Collection (Entity type)	Body-site specific assemblies: Reads that were not assembled as part of the whole metagenome SOAPden...
	HHS 763496533 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 763961826 Subject (Entity type)	A subject from HMP produced as part of the HHS project

SRS013946

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

HHS 763577454

Subject (Entity type)

A subject produced as part of the HHS project

Keratinized gingiva.tar.bz2

File (Entity type)

A 14.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS019125

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

SRS014687

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

SRS019025

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

SRS014473

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

hmbsa1

Collection (Entity type)

Body-site specific assemblies: Reads that were not assembled as part of the whole metagenome SOAPden...

HHS 763496533

Subject (Entity type)

A subject from HMP produced as part of the HHS project

HHS 763961826

Subject (Entity type)

A subject from HMP produced as part of the HHS project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.