hmgi1 buccal mucosa (Collection)

Subset Collection:

hmgi1

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:The collection contains gene index files generated by running gene predictions and annotations on assemblies from individual buccal_mucosa sample reads, after quality control screening. Gene sequence and annotation is provided in gff3 format, nucleotide and protein sequences in multi-FASTA format. Functional attributes assigned to each gene prediction include gene name, gene symbol, Gene Ontology (GO) assignments and Enzyme Commission (EC) numbers.

Abbreviation:hmgi1_buccal_mucosa

Results found

Linked to

	Label	Description
	SRS019124 Biosample (Entity type)	A biosample produced as part of the HHS project
	SRS016196.with fasta.gff3.bz2 File (Entity type)	A 6.22 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 763536994 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	SRS014126 aa.fasta.bz2 File (Entity type)	A 1.12 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS013945 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	SRS019124 nucleotide.fasta.bz2 File (Entity type)	A 9.14 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 159005010 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 763901136 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	SRS011090 Biosample (Entity type)	A biosample from HMP produced as part of the HHS project
	SRS019329 nucleotide.fasta.bz2 File (Entity type)	A 5.58 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS019124

Biosample (Entity type)

A biosample produced as part of the HHS project

SRS016196.with fasta.gff3.bz2

File (Entity type)

A 6.22 MB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 763536994

Subject (Entity type)

A subject from HMP produced as part of the HHS project

SRS014126 aa.fasta.bz2

File (Entity type)

A 1.12 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS013945

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

SRS019124 nucleotide.fasta.bz2

File (Entity type)

A 9.14 MB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 159005010

Subject (Entity type)

A subject from HMP produced as part of the HHS project

HHS 763901136

Subject (Entity type)

A subject from HMP produced as part of the HHS project

SRS011090

Biosample (Entity type)

A biosample from HMP produced as part of the HHS project

SRS019329 nucleotide.fasta.bz2

File (Entity type)

A 5.58 MB file from HMP produced from OBI:0002623 as part of the HHS project

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.