SRS016559 (Biosample)

Subject:

HHS 159753524

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

posterior fornix of vagina

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS016559 v2.fsa.bz2 File (Entity type)	A 106 KB file from HMP produced from OBI:0002763 as part of the HHS project
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...
	hmgoi1 viruses Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for virus genes.
	hmrac2 SRS016559 Collection (Entity type)	Reads from SRS016559 sample are aligned to its assembled contigs.
	SRS016559.rapsearch2.m8 File (Entity type)	A 8.00 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 virulence factors Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for virulence_factors.
	protease md.txt.bz2 File (Entity type)	A 139 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS016559 v2.fsa.bz2

File (Entity type)

A 106 KB file from HMP produced from OBI:0002763 as part of the HHS project

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmgoi1 viruses

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for virus genes.

hmrac2 SRS016559

Collection (Entity type)

Reads from SRS016559 sample are aligned to its assembled contigs.

SRS016559.rapsearch2.m8

File (Entity type)

A 8.00 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 virulence factors

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for virulence_factors.

protease md.txt.bz2

File (Entity type)

A 139 MB file from HMP produced from OBI:0002623 as part of the HHS project

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.