SRS013711 (Biosample)

Subject:

HHS 159268001

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

buccal mucosa

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmgi1 buccal mucosa Collection (Entity type)	The collection contains gene index files generated by running gene predictions and annotations on as...
	hmasm2 SRS013711 Collection (Entity type)	Contigs assembled from sequence reads of SRS013711 sample using IDBA-UD
	hmrac2 SRS013711 Collection (Entity type)	Reads from SRS013711 sample are aligned to its assembled contigs.
	SRS013711 v1.fsa.bz2 File (Entity type)	A 115 KB file from HMP produced from OBI:0002763 as part of the HHS project
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	buccal mucosa nr nuc.fasta.bz2 File (Entity type)	A 120 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcasm2 159268001 buccal mucosa Collection (Entity type)	Quality trimmed reads generated from buccal_mucosa samples from HHS_159268001 host across multiple v...
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS013711 hmwgsqcv1.tar.bz2 File (Entity type)	A 752 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc2 buccal mucosa Collection (Entity type)	This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

hmgi1 buccal mucosa

Collection (Entity type)

The collection contains gene index files generated by running gene predictions and annotations on as...

hmasm2 SRS013711

Collection (Entity type)

Contigs assembled from sequence reads of SRS013711 sample using IDBA-UD

hmrac2 SRS013711

Collection (Entity type)

Reads from SRS013711 sample are aligned to its assembled contigs.

SRS013711 v1.fsa.bz2

File (Entity type)

A 115 KB file from HMP produced from OBI:0002763 as part of the HHS project

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

buccal mucosa nr nuc.fasta.bz2

File (Entity type)

A 120 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcasm2 159268001 buccal mucosa

Collection (Entity type)

Quality trimmed reads generated from buccal_mucosa samples from HHS_159268001 host across multiple v...

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS013711 hmwgsqcv1.tar.bz2

File (Entity type)

A 752 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc2 buccal mucosa

Collection (Entity type)

This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.