SRS016319 (Biosample)

Subject:

HHS 765074482

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

dorsum of tongue

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmbsa1 tongue dorsum Collection (Entity type)	Reads that were not assembled as part of the whole metagenome SOAPdenovo-based assembly approach (av...
	SRS016319.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 6.16 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS016319 Collection (Entity type)	Contigs assembled from sequence reads of SRS016319 sample using IDBA-UD
	SRS016319 v1.fsa.bz2 File (Entity type)	A 365 KB file from HMP produced from OBI:0002763 as part of the HHS project
	tongue dorsum nr.fasta.bz2 File (Entity type)	A 286 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi2 SRS016319 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS016319 sa...
	765074482.td.gff3.bz2 File (Entity type)	A 14.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS016319.with fasta.gff3.bz2 File (Entity type)	A 52.2 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS016319 hmwgsqcv1.tar.bz2 File (Entity type)	A 6.56 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...

hmbsa1 tongue dorsum

Collection (Entity type)

Reads that were not assembled as part of the whole metagenome SOAPdenovo-based assembly approach (av...

SRS016319.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 6.16 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS016319

Collection (Entity type)

Contigs assembled from sequence reads of SRS016319 sample using IDBA-UD

SRS016319 v1.fsa.bz2

File (Entity type)

A 365 KB file from HMP produced from OBI:0002763 as part of the HHS project

tongue dorsum nr.fasta.bz2

File (Entity type)

A 286 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi2 SRS016319

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS016319 sa...

765074482.td.gff3.bz2

File (Entity type)

A 14.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS016319.with fasta.gff3.bz2

File (Entity type)

A 52.2 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS016319 hmwgsqcv1.tar.bz2

File (Entity type)

A 6.56 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

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CFDE Workbench

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.