SRS054590 (Biosample)

Subject:

HHS 338793263

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

feces

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmgc2 stool Collection (Entity type)	This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...
	hmgi2 SRS054590 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS054590 sa...
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc1 stool Collection (Entity type)	This collection contains a non-redundant catalog of bacterial genes from stool samples. This was don...
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	338793263.st.fna.bz2 File (Entity type)	A 28.0 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...
	hmcgc2 stool Collection (Entity type)	Non-redundant catalog of bacterial genes in stool that was generated by clustering the coassembled g...
	hmwgsqcv2 SRS054590 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS054590 sample to SRA whe...

hmgc2 stool

Collection (Entity type)

This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

hmgi2 SRS054590

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS054590 sa...

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc1 stool

Collection (Entity type)

This collection contains a non-redundant catalog of bacterial genes from stool samples. This was don...

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

338793263.st.fna.bz2

File (Entity type)

A 28.0 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmcgc2 stool

Collection (Entity type)

Non-redundant catalog of bacterial genes in stool that was generated by clustering the coassembled g...

hmwgsqcv2 SRS054590

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS054590 sample to SRA whe...

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.