SRS023850 (Biosample)

Subject:

HHS 158883629

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

posterior fornix of vagina

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS023850 nucleotide.fasta.bz2 File (Entity type)	A 408 KB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 158883629 Subject (Entity type)	A subject produced as part of the HHS project
	hmcgc2-posterior fornix-0.90-centroids.fa.bz2 File (Entity type)	A 89.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrac2 SRS023850 Collection (Entity type)	Reads from SRS023850 sample are aligned to its assembled contigs.
	hmcasm2 158883629 posterior fornix Collection (Entity type)	Quality trimmed reads generated from posterior_fornix samples from HHS_158883629 host across multipl...
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	SRS023850.gff3.bz2 File (Entity type)	A 200 KB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS023850 nucleotide.fasta.bz2

File (Entity type)

A 408 KB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 158883629

Subject (Entity type)

A subject produced as part of the HHS project

hmcgc2-posterior fornix-0.90-centroids.fa.bz2

File (Entity type)

A 89.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmrac2 SRS023850

Collection (Entity type)

Reads from SRS023850 sample are aligned to its assembled contigs.

hmcasm2 158883629 posterior fornix

Collection (Entity type)

Quality trimmed reads generated from posterior_fornix samples from HHS_158883629 host across multipl...

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

SRS023850.gff3.bz2

File (Entity type)

A 200 KB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.