SRS058336 (Biosample)

Subject:

HHS 764447348

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

dorsum of tongue

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmbsa1 tongue dorsum Collection (Entity type)	Reads that were not assembled as part of the whole metagenome SOAPdenovo-based assembly approach (av...
	hmrarg2 SRS058336 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS058336 sample to MetaRef reference gen...
	hmcgi2 764447348 tongue dorsum Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_764447348_tongue_dorsum" collection) w...
	SRS058336 nucleotide.fasta.bz2 File (Entity type)	A 26.0 MB file from HMP produced from OBI:0002623 as part of the HHS project
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	tongue dorsum nr.fasta.bz2 File (Entity type)	A 286 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS058336.fna.bz2 File (Entity type)	A 41.2 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmbsa1 tongue dorsum

Collection (Entity type)

Reads that were not assembled as part of the whole metagenome SOAPdenovo-based assembly approach (av...

hmrarg2 SRS058336

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS058336 sample to MetaRef reference gen...

hmcgi2 764447348 tongue dorsum

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_764447348_tongue_dorsum" collection) w...

SRS058336 nucleotide.fasta.bz2

File (Entity type)

A 26.0 MB file from HMP produced from OBI:0002623 as part of the HHS project

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

tongue dorsum nr.fasta.bz2

File (Entity type)

A 286 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS058336.fna.bz2

File (Entity type)

A 41.2 MB file from HMP produced from OBI:0002623 as part of the HHS project

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.