CFDE Workbench
DataKnowledgeCloudtrainingcoordination
CFDE Workbench

27d3a7a1-2005-4970-a78d-67771abd24d4.variant calling summary metrics (File)

Project:

SD BHJXBDQK

Project (Entity type)
Ncbi Taxonomy:

Homo sapiens

Taxonomy (Entity type)
File Format:

Textual format

File Format (Entity type)
Disease:

cancer

Disease (Entity type)
Dcc Asset:

2026Q3 C2M2 datapackage.zip

Processed File (Entity type)
Dcc:

Kids First

DCC (Entity type)
Data Type:

Quality control report

Data Type (Entity type)
Assay Type:

whole genome sequencing assay

Assay Type (Entity type)
Anatomy:

Spinal Cord

Anatomy (Entity type)
Filename:27d3a7a1-2005-4970-a78d-67771abd24d4.variant_calling_summary_metrics
Dbgap Study Id:phs002517
Creation Time:2024-06-26 01:34:56.650508
Access URL:
s3://opendata-chop-study-us-east-1-prd-sd-bhjxbdqk/harmonized-data/workflow-outputs/family-joint-genotyping/27d3a7a1-2005-4970-a78d-67771abd24d4.variant_calling_summary_metrics
Workbench DRS:
drs://cfde.cloud/e927b923-947c-5b5e-a0d8-07349312d26f
Results found

Linked to

 

Label

Description

 

Subject

PT S4YNE17X

Subject (Entity type)

A subject produced as part of the SD BHJXBDQK project

Biosample

BS HHJZ05XC

Biosample (Entity type)

A biosample from Kids First produced as part of the SD BHJXBDQK project

Subject

PT P2SF9ZSJ

Subject (Entity type)

A subject produced as part of the SD BHJXBDQK project

Subject

PT HMAMM0EZ

Subject (Entity type)

A subject produced as part of the SD BHJXBDQK project

Biosample

BS JP7CC9PD

Biosample (Entity type)

A biosample from Kids First produced as part of the SD BHJXBDQK project

Biosample

BS 63T9ZZP9

Biosample (Entity type)

A biosample from Kids First produced as part of the SD BHJXBDQK project

  • Subject

    PT S4YNE17X

    Subject (Entity type)

    A subject produced as part of the SD BHJXBDQK project

  • Biosample

    BS HHJZ05XC

    Biosample (Entity type)

    A biosample from Kids First produced as part of the SD BHJXBDQK project

  • Subject

    PT P2SF9ZSJ

    Subject (Entity type)

    A subject produced as part of the SD BHJXBDQK project

  • Subject

    PT HMAMM0EZ

    Subject (Entity type)

    A subject produced as part of the SD BHJXBDQK project

  • Biosample

    BS JP7CC9PD

    Biosample (Entity type)

    A biosample from Kids First produced as part of the SD BHJXBDQK project

  • Biosample

    BS 63T9ZZP9

    Biosample (Entity type)

    A biosample from Kids First produced as part of the SD BHJXBDQK project

    • DISPLAY PER PAGE
    CFDE Workbench
    Report a bug
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    @CFDE Workbench 2026
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    CFDE Workbench
    Report a bug
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    @CFDE Workbench 2026
    This repository is under review for potential modification in compliance with Administration directives.