HBM488.MQHC.864 (Collection)

Taxon:

Homo sapiens

Taxonomy (Entity type)

Dcc Asset:

hubmap-c2m2-jun26.zip

Processed File (Entity type)

Dcc:

HuBMAP

DCC (Entity type)

Anatomy:

left kidney

Anatomy (Entity type)

Persistent Id:https://doi.org/10.35079/HBM488.MQHC.864

Has Time Series Data:0

Description:Autofluorescence microscopy collected by the Biomolecular Multimodal Imaging Center (BIOMIC) at Vanderbilt University. BIOMIC is a Tissue Mapping Center that is part of the NIH funded Human Biomolecular Atlas Program (HuBMAP). Autofluorescence microscopy images were collected with a Carl Zeiss Microscopy AxioScan.Z1 using 3 channels/filters- DAPI (excitation 335-383/emission 420-470 nm), eGFP (excitation 450-490/emission 500-550 nm), and DsRed (excitation 538-562/emission 570-640 nm).

Creation Time:2025-04-08 19:40:11.732000

Results found

Linked to

	Label	Description
	left kidney Anatomy (Entity type)	A kidney that is part of a left side of organism.
	ec8bc1b3c7deaedde43e77eb830e42ac-metadata.tsv File (Entity type)	A 761 B file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	VAN0023-LK-4-16-AF.ome.tiff File (Entity type)	A 2.15 GB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	metadata.json File (Entity type)	A 57.1 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	antibodies.tsv File (Entity type)	A 261 B file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	contributors.tsv File (Entity type)	A 7.04 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	microscope hardware.json File (Entity type)	A 5.91 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	Service report 8582374812-10 2023-03-03 15-40.pdf File (Entity type)	A 104 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	VAN0023-LK-4-16-AF.ome-tiff.channels.csv File (Entity type)	A 149 B file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project
	Axio Scan Z1 PrevMCheckList 20230303-153930.pdf File (Entity type)	A 263 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

left kidney

Anatomy (Entity type)

A kidney that is part of a left side of organism.

ec8bc1b3c7deaedde43e77eb830e42ac-metadata.tsv

File (Entity type)

A 761 B file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

VAN0023-LK-4-16-AF.ome.tiff

File (Entity type)

A 2.15 GB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

metadata.json

File (Entity type)

A 57.1 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

antibodies.tsv

File (Entity type)

A 261 B file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

contributors.tsv

File (Entity type)

A 7.04 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

microscope hardware.json

File (Entity type)

A 5.91 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

Service report 8582374812-10 2023-03-03 15-40.pdf

File (Entity type)

A 104 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

VAN0023-LK-4-16-AF.ome-tiff.channels.csv

File (Entity type)

A 149 B file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

Axio Scan Z1 PrevMCheckList 20230303-153930.pdf

File (Entity type)

A 263 KB file from HuBMAP produced from OBI:0003087 as part of the Vanderbilt TMC project

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.