SNT695.CQGZ.986 (Collection)

Taxon:

Mus musculus

Taxonomy (Entity type)

Subset Collection:

SNT786.HQFV.633

Collection (Entity type)

Dcc Asset:

sennet c2m2 jun26.zip

Processed File (Entity type)

Dcc:

SenNet

DCC (Entity type)

Anatomy:

Liver

Anatomy (Entity type)

Persistent Id:https://doi.org/10.60586/SNT695.CQGZ.986

Has Time Series Data:0

Description:This data is for transcriptomics study of mouse livers of FVB:C57BL/6 mice utilizing the Nanostring GeoMx DSP Spatial Profiler. Mouse liver tissues from young (4 months old), and old (approximately 2 years - 2.5 years old) male and female mice were sequenced.

Creation Time:2025-01-09 16:56:47.865000

Results found

Linked to

	Label	Description
	DSP-1001660035173-E-F12 S168 L005 R2 001.fastq.gz File (Entity type)	A 68.3 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	DSP-1001660035173-E-F12 S168 L005 R1 001.fastq.gz File (Entity type)	A 70.9 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	metadata.json File (Entity type)	A 68.2 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	geomx-rnaseq-with-probes-metadata.tsv File (Entity type)	A 1.90 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	Project 060 20240305T2331 LabWorksheet.txt File (Entity type)	A 61.3 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	SampleSheet.csv File (Entity type)	A 16.5 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	GeoMx3 Niedernhofer Project 060.ome.tiff File (Entity type)	A 17.8 GB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	microscope hardware.json File (Entity type)	A 3.00 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	GeoMx3-ome-tiff.channels.csv File (Entity type)	A 184 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	e2210007b5d01362c60d5fbf801f06a8-metadata.tsv File (Entity type)	A 1.12 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

DSP-1001660035173-E-F12 S168 L005 R2 001.fastq.gz

File (Entity type)

A 68.3 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

DSP-1001660035173-E-F12 S168 L005 R1 001.fastq.gz

File (Entity type)

A 70.9 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

metadata.json

File (Entity type)

A 68.2 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

geomx-rnaseq-with-probes-metadata.tsv

File (Entity type)

A 1.90 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

Project 060 20240305T2331 LabWorksheet.txt

File (Entity type)

A 61.3 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

SampleSheet.csv

File (Entity type)

A 16.5 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

GeoMx3 Niedernhofer Project 060.ome.tiff

File (Entity type)

A 17.8 GB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

microscope hardware.json

File (Entity type)

A 3.00 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

GeoMx3-ome-tiff.channels.csv

File (Entity type)

A 184 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

e2210007b5d01362c60d5fbf801f06a8-metadata.tsv

File (Entity type)

A 1.12 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.