827a8bdd-1aa0-4423-a578-c30bb51c7e4d (Collection)

Project:

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

Dcc Asset:

251215 4dn c2m2 submission.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESQV6Y4JL

Description:4DNESQV6Y4JL: Liquified Chromatin Hi-C on K562 cells - Purified nuclei, pre-digestion with buffer for 4 hours, digestion with DpnII These are biological replicate in which we performed Liquid chromatin Hi-C on K652 cells. Nuclei were purified then were incubated with just digestion buffer for 4 hours before performing Hi-C 2.0

Creation Time:2019-11-04 00:00:00.000000

Abbreviation:4DNESQV6Y4JL

Results found

Linked to

	Label	Description
	1032c021-c18a-49ab-90d2-fd2cc5a8e1b7 Subject (Entity type)	A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	f58cfc31-3a43-45bf-a2db-2d390937cf21 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESQV6Y4JL
	329c2089-86bb-4df2-ae72-5facd5660730 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESQV6Y4JL
	5f60c0de-0ce5-4824-a949-e7dc35aa33ab Collection (Entity type)	Biological replicate 3, Technical replicate 1 of 4DNESQV6Y4JL
	4DNFIM8TVU9X.bw File (Entity type)	A 213 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI8NOPTEB.bw File (Entity type)	A 8.47 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIZT8DRA6.mcool File (Entity type)	A 3.54 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIKOM7GZ8.bed.gz File (Entity type)	A 147 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIJBJ6QVH.hic File (Entity type)	A 5.35 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI7HCPDIT.pairs.gz File (Entity type)	A 8.87 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

1032c021-c18a-49ab-90d2-fd2cc5a8e1b7

Subject (Entity type)

A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

f58cfc31-3a43-45bf-a2db-2d390937cf21

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESQV6Y4JL

329c2089-86bb-4df2-ae72-5facd5660730

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESQV6Y4JL

5f60c0de-0ce5-4824-a949-e7dc35aa33ab

Collection (Entity type)

Biological replicate 3, Technical replicate 1 of 4DNESQV6Y4JL

4DNFIM8TVU9X.bw

File (Entity type)

A 213 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI8NOPTEB.bw

File (Entity type)

A 8.47 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIZT8DRA6.mcool

File (Entity type)

A 3.54 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIKOM7GZ8.bed.gz

File (Entity type)

A 147 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIJBJ6QVH.hic

File (Entity type)

A 5.35 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI7HCPDIT.pairs.gz

File (Entity type)

A 8.87 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

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