N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c (Collection)

Project:

U19NS130608

Project (Entity type)

Dcc Asset:

C2M2 datapackage 20260317.zip

Processed File (Entity type)

Dcc:

SPARC

DCC (Entity type)

Persistent Id:https://doi.org/10.26275/aikc-g5tv

Description:Single nuclei sequencing of spinal cord from 19 subjects (1 dorsal horn and 1 ventral horn per subject)

Abbreviation:aikc_g5tv

Results found

Linked to

	Label	Description
	primary sub-UTD-DN0177 sam-UTD-DN0177 sam-UTD-DN0177-SC-DH sam-UTD-DN0177-SC-DH-run004 count analysis diffexp gene expression kmeans 5 clusters differential expression.csv File (Entity type)	A 5.57 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0105 sam-UTD-DN0105 sam-UTD-DN0105-SC-VH sam-UTD-DN0105-SC-VH-run008 count analysis tsne gene expression 2 components projection.csv File (Entity type)	A 605 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0071 sam-UTD-DN0071 sam-UTD-DN0071-SC-VH count sample raw feature bc matrix.h5 File (Entity type)	A 27.5 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0095 sam-UTD-DN0095 sam-UTD-DN0095-SC-DH sam-UTD-DN0095-SC-DH-run004 count analysis pca gene expression 10 components components.csv File (Entity type)	A 3.91 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0167 sam-UTD-DN0167 sam-UTD-DN0167-SC-VH sam-UTD-DN0167-SC-VH-run008 count sample raw feature bc matrix barcodes.tsv.gz File (Entity type)	A 1.23 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0228 sam-UTD-DN0228 sam-UTD-DN0228-SC-VH count sample filtered feature bc matrix matrix.mtx.gz File (Entity type)	A 32.2 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0059 sam-UTD-DN0059 sam-UTD-DN0059-SC-VH count sample raw feature bc matrix features.tsv.gz File (Entity type)	A 338 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0110 sam-UTD-DN0110 sam-UTD-DN0110-SC-VH count analysis clustering gene expression kmeans 7 clusters clusters.csv File (Entity type)	A 230 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0074 sam-UTD-DN0074 sam-UTD-DN0074-SC-DH count analysis clustering gene expression kmeans 6 clusters clusters.csv File (Entity type)	A 143 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0105 sam-UTD-DN0105 sam-UTD-DN0105-SC-DH sam-UTD-DN0105-SC-DH-run004 count analysis clustering gene expression kmeans 5 clusters clusters.csv File (Entity type)	A 234 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0177 sam-UTD-DN0177 sam-UTD-DN0177-SC-DH sam-UTD-DN0177-SC-DH-run004 count analysis diffexp gene expression kmeans 5 clusters differential expression.csv

File (Entity type)

A 5.57 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0105 sam-UTD-DN0105 sam-UTD-DN0105-SC-VH sam-UTD-DN0105-SC-VH-run008 count analysis tsne gene expression 2 components projection.csv

File (Entity type)

A 605 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0071 sam-UTD-DN0071 sam-UTD-DN0071-SC-VH count sample raw feature bc matrix.h5

File (Entity type)

A 27.5 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0095 sam-UTD-DN0095 sam-UTD-DN0095-SC-DH sam-UTD-DN0095-SC-DH-run004 count analysis pca gene expression 10 components components.csv

File (Entity type)

A 3.91 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0167 sam-UTD-DN0167 sam-UTD-DN0167-SC-VH sam-UTD-DN0167-SC-VH-run008 count sample raw feature bc matrix barcodes.tsv.gz

File (Entity type)

A 1.23 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0228 sam-UTD-DN0228 sam-UTD-DN0228-SC-VH count sample filtered feature bc matrix matrix.mtx.gz

File (Entity type)

A 32.2 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0059 sam-UTD-DN0059 sam-UTD-DN0059-SC-VH count sample raw feature bc matrix features.tsv.gz

File (Entity type)

A 338 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0110 sam-UTD-DN0110 sam-UTD-DN0110-SC-VH count analysis clustering gene expression kmeans 7 clusters clusters.csv

File (Entity type)

A 230 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0074 sam-UTD-DN0074 sam-UTD-DN0074-SC-DH count analysis clustering gene expression kmeans 6 clusters clusters.csv

File (Entity type)

A 143 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0105 sam-UTD-DN0105 sam-UTD-DN0105-SC-DH sam-UTD-DN0105-SC-DH-run004 count analysis clustering gene expression kmeans 5 clusters clusters.csv

File (Entity type)

A 234 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.