hmwgsqcv2 SRS011397 (Collection)

Subset Collection:

hmwgsqc2

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:QC and Merged reads: Sequencing center deposited metagenome sequence for SRS011397 sample to SRA where human DNA was removed. HMP DACC downloaded metagenome from the SRA. The SRA native format read files were converted to FASTQ, and were concatenated per read direction to create a single pair of FASTQ files for SRS011397. FASTQs were converted to unaligned BAM and exact duplicates removed. All reads were trimmed and length filtered. WMS reads and accompanying metadata are available at the SRA and dbGaP under two studies: SRP002163 and SRP056641.

Abbreviation:hmwgsqcv2_SRS011397

Results found

Linked to

	Label	Description
	SRS011397 Biosample (Entity type)	A biosample produced as part of the HHS project
	SRS011397 hmwgsqcv2.tar.bz2 File (Entity type)	A 165 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 158984779 Subject (Entity type)	A subject from HMP produced as part of the HHS project

SRS011397

Biosample (Entity type)

A biosample produced as part of the HHS project

SRS011397 hmwgsqcv2.tar.bz2

File (Entity type)

A 165 MB file from HMP produced from OBI:0002623 as part of the HHS project

HHS 158984779

Subject (Entity type)

A subject from HMP produced as part of the HHS project

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