hmwgsqcv2 SRS013382 (Collection)

Subset Collection:

hmwgsqc2

Collection (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:QC and Merged reads: Sequencing center deposited metagenome sequence for SRS013382 sample to SRA where human DNA was removed. HMP DACC downloaded metagenome from the SRA. The SRA native format read files were converted to FASTQ, and were concatenated per read direction to create a single pair of FASTQ files for SRS013382. FASTQs were converted to unaligned BAM and exact duplicates removed. All reads were trimmed and length filtered. WMS reads and accompanying metadata are available at the SRA and dbGaP under two studies: SRP002163 and SRP056641.

Abbreviation:hmwgsqcv2_SRS013382

Results found

Linked to

	Label	Description
	SRS013382 Biosample (Entity type)	A biosample produced as part of the HHS project
	HHS 159328691 Subject (Entity type)	A subject produced as part of the HHS project
	SRS013382 hmwgsqcv2.tar.bz2 File (Entity type)	A 719 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS013382

Biosample (Entity type)

A biosample produced as part of the HHS project

HHS 159328691

Subject (Entity type)

A subject produced as part of the HHS project

SRS013382 hmwgsqcv2.tar.bz2

File (Entity type)

A 719 MB file from HMP produced from OBI:0002623 as part of the HHS project

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