SNT742.SMJZ.262 (Collection)

Taxon:

Mus musculus

Taxonomy (Entity type)

Subset Collection:

SNT798.MWZW.437

Collection (Entity type)

Dcc Asset:

sennet c2m2 jun26.zip

Processed File (Entity type)

Dcc:

SenNet

DCC (Entity type)

Anatomy:

Liver

Anatomy (Entity type)

Persistent Id:https://doi.org/10.60586/SNT742.SMJZ.262

Has Time Series Data:0

Description:This data is for transcriptomics study of mouse livers of FVB:C57BL/6 mice utilizing the Nanostring GeoMx DSP Spatial Profiler. Mouse liver tissues from young (4 months old), and old (approximately 2 years - 2.5 years old) male and female mice were sequenced.

Creation Time:2025-01-09 16:57:25.084000

Results found

Linked to

	Label	Description
	DSP-1001660035172-F-A05 S197 L005 R1 001.fastq.gz File (Entity type)	A 79.6 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	DSP-1001660035172-F-A05 S197 L005 R2 001.fastq.gz File (Entity type)	A 76.2 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	geomx-rnaseq-with-probes-metadata.tsv File (Entity type)	A 1.90 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	GeoMx4-ome-tiff.channels.csv File (Entity type)	A 184 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	Project 060 20240305T2331 LabWorksheet.txt File (Entity type)	A 61.3 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	10f6e8c178e2720bb15e29803bc94d1c-metadata.tsv File (Entity type)	A 1.12 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	SampleSheet.csv File (Entity type)	A 16.5 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	whitelist.txt File (Entity type)	A 262 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	contributors.tsv File (Entity type)	A 5.20 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project
	microscope hardware.json File (Entity type)	A 3.00 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

DSP-1001660035172-F-A05 S197 L005 R1 001.fastq.gz

File (Entity type)

A 79.6 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

DSP-1001660035172-F-A05 S197 L005 R2 001.fastq.gz

File (Entity type)

A 76.2 MB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

geomx-rnaseq-with-probes-metadata.tsv

File (Entity type)

A 1.90 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

GeoMx4-ome-tiff.channels.csv

File (Entity type)

A 184 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

Project 060 20240305T2331 LabWorksheet.txt

File (Entity type)

A 61.3 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

10f6e8c178e2720bb15e29803bc94d1c-metadata.tsv

File (Entity type)

A 1.12 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

SampleSheet.csv

File (Entity type)

A 16.5 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

whitelist.txt

File (Entity type)

A 262 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

contributors.tsv

File (Entity type)

A 5.20 KB file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

microscope hardware.json

File (Entity type)

A 3.00 B file from SenNet produced from OBI:0002631 as part of the TMC University of Minnesota Robbins project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.