HBM747.DHRG.482 (Collection)

Taxon:

Homo sapiens

Taxonomy (Entity type)

Dcc Asset:

hubmap-c2m2-jun26.zip

Processed File (Entity type)

Dcc:

HuBMAP

DCC (Entity type)

Anatomy:

uterus

Anatomy (Entity type)

Persistent Id:https://doi.org/10.35079/HBM747.DHRG.482

Has Time Series Data:0

Description:This upload supersedes the one originally done in December 2023. It contains exactly the same raw data files (FASTQ) for the same 83 sample datasets, for uterus/ovary/Fallopian tube. The only things that have changed are: 1) a correction to one field in the Visium-RNAseq metadata file (the "library layout" for all samples); and 2) new OME-TIFF files, with the exact same image data as before, but with corrections to the metadata in the XML header of each file. : ./Visium_9_ENDC_B4_S1

Creation Time:2025-02-19 02:27:49.055000

Results found

Linked to

	Label	Description
	uterus Anatomy (Entity type)	The female muscular organ of gestation in which the developing embryo or fetus is nourished until bi...
	Visium 9 ENDC B4 S1 S7 L002 R1 001.fastq.gz File (Entity type)	A 2.35 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Visium 9 ENDC B4 S1 S7 L001 R1 001.fastq.gz File (Entity type)	A 2.38 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Visium 9 ENDC B4 S1 S7 L001 R2 001.fastq.gz File (Entity type)	A 5.44 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Visium 9 ENDC B4 S1 S7 L002 R2 001.fastq.gz File (Entity type)	A 5.34 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	V11A19-079.gpr File (Entity type)	A 991 KB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0040.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0088.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0012.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0115.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

uterus

Anatomy (Entity type)

The female muscular organ of gestation in which the developing embryo or fetus is nourished until bi...

Visium 9 ENDC B4 S1 S7 L002 R1 001.fastq.gz

File (Entity type)

A 2.35 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Visium 9 ENDC B4 S1 S7 L001 R1 001.fastq.gz

File (Entity type)

A 2.38 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Visium 9 ENDC B4 S1 S7 L001 R2 001.fastq.gz

File (Entity type)

A 5.44 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Visium 9 ENDC B4 S1 S7 L002 R2 001.fastq.gz

File (Entity type)

A 5.34 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

V11A19-079.gpr

File (Entity type)

A 991 KB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0040.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0088.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0012.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0115.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.