HBM447.SCXW.562 (Collection)

Taxon:

Homo sapiens

Taxonomy (Entity type)

Dcc Asset:

hubmap-c2m2-jun26.zip

Processed File (Entity type)

Dcc:

HuBMAP

DCC (Entity type)

Anatomy:

left ovary

Anatomy (Entity type)

Persistent Id:https://doi.org/10.35079/HBM447.SCXW.562

Has Time Series Data:0

Description:Visium spatial transcriptomics data from Penn-TMC for 99 tissue slices from uterus/ovary/Fallopian tube, from two human female donors. : ./Visium_13_5_S2_b

Creation Time:2024-02-02 22:10:28.002000

Results found

Linked to

	Label	Description
	left ovary Anatomy (Entity type)	An ovary that is part of a left side of organism.
	Visium 13 5 S2 b S6 L002 R2 001.fastq.gz File (Entity type)	A 3.23 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Visium 13 5 S2 b S6 L001 R1 001.fastq.gz File (Entity type)	A 1.40 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Visium 13 5 S2 b S6 L001 R2 001.fastq.gz File (Entity type)	A 3.20 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Visium 13 5 S2 b S6 L002 R1 001.fastq.gz File (Entity type)	A 1.41 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0066.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0051.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0081.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	h-and-e-metadata.tsv File (Entity type)	A 985 B file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project
	Brightfield HE 10msec image 0029.tiff File (Entity type)	A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

left ovary

Anatomy (Entity type)

An ovary that is part of a left side of organism.

Visium 13 5 S2 b S6 L002 R2 001.fastq.gz

File (Entity type)

A 3.23 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Visium 13 5 S2 b S6 L001 R1 001.fastq.gz

File (Entity type)

A 1.40 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Visium 13 5 S2 b S6 L001 R2 001.fastq.gz

File (Entity type)

A 3.20 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Visium 13 5 S2 b S6 L002 R1 001.fastq.gz

File (Entity type)

A 1.41 GB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0066.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0051.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0081.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

h-and-e-metadata.tsv

File (Entity type)

A 985 B file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

Brightfield HE 10msec image 0029.tiff

File (Entity type)

A 17.8 MB file from HuBMAP produced from OBI:0002631 as part of the TMC University of Pennsylvania project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.