SRS019029 (Biosample)

Subject:

HHS 763961826

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

subgingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	hmgc1 subgingival plaque Collection (Entity type)	This collection contains a non-redundant catalog of bacterial genes from subgingival_plaque samples....
	SRS019029.genels.txt.bz2 File (Entity type)	A 4.66 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...
	hmgoi1 viruses Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for virus genes.
	SRS019029 hmrac2.tar.bz2 File (Entity type)	A 3.16 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgc2-subgingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 68.0 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgoi1 SRS019029 genels Collection (Entity type)	Gene abundance file (ie how many copies are present in the community) for SRS019029 sample

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

hmgc1 subgingival plaque

Collection (Entity type)

This collection contains a non-redundant catalog of bacterial genes from subgingival_plaque samples....

SRS019029.genels.txt.bz2

File (Entity type)

A 4.66 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmgoi1 viruses

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for virus genes.

SRS019029 hmrac2.tar.bz2

File (Entity type)

A 3.16 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgc2-subgingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 68.0 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgoi1 SRS019029 genels

Collection (Entity type)

Gene abundance file (ie how many copies are present in the community) for SRS019029 sample

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Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.