SRS016541 (Biosample)

Subject:

HHS 159753524

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS016541 v2.fsa.bz2 File (Entity type)	A 149 KB file from HMP produced from OBI:0002763 as part of the HHS project
	SRS016541 hmrac2.tar.bz2 File (Entity type)	A 4.61 GB file from HMP produced from OBI:0002623 as part of the HHS project
	Supragingival plaque.tar.bz2 File (Entity type)	A 259 MB file from HMP produced from OBI:0002623 as part of the HHS project
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi2 SRS016541 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS016541 sa...
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...
	hmgoi1 viruses Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for virus genes.
	hmasm2 SRS016541 Collection (Entity type)	Contigs assembled from sequence reads of SRS016541 sample using IDBA-UD
	SRS016541.scaffolds.fa.bz2 File (Entity type)	A 21.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS016541 v2.fsa.bz2

File (Entity type)

A 149 KB file from HMP produced from OBI:0002763 as part of the HHS project

SRS016541 hmrac2.tar.bz2

File (Entity type)

A 4.61 GB file from HMP produced from OBI:0002623 as part of the HHS project

Supragingival plaque.tar.bz2

File (Entity type)

A 259 MB file from HMP produced from OBI:0002623 as part of the HHS project

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi2 SRS016541

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS016541 sa...

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmgoi1 viruses

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for virus genes.

hmasm2 SRS016541

Collection (Entity type)

Contigs assembled from sequence reads of SRS016541 sample using IDBA-UD

SRS016541.scaffolds.fa.bz2

File (Entity type)

A 21.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.