SRS078733 (Biosample)

Subject:

HHS 159268001

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

dorsum of tongue

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	159268001.td.gff3.bz2 File (Entity type)	A 21.5 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS078733 Collection (Entity type)	Contigs assembled from sequence reads of SRS078733 sample using IDBA-UD
	hmwgsqcv2 SRS078733 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS078733 sample to SRA whe...
	SRS078733 hmwgsqcv2.tar.bz2 File (Entity type)	A 5.54 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgi2 159268001 tongue dorsum Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_159268001_tongue_dorsum" collection) w...
	SRS078733.rapsearch2.m8 File (Entity type)	A 767 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgc2 tongue dorsum Collection (Entity type)	Non-redundant catalog of bacterial genes in tongue dorsum that was generated by clustering the coass...
	hmgi2 SRS078733 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS078733 sa...
	SRS078733.tar.bz2 File (Entity type)	A 11.0 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS078733.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 8.37 GB file from HMP produced from OBI:0002623 as part of the HHS project

159268001.td.gff3.bz2

File (Entity type)

A 21.5 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS078733

Collection (Entity type)

Contigs assembled from sequence reads of SRS078733 sample using IDBA-UD

hmwgsqcv2 SRS078733

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS078733 sample to SRA whe...

SRS078733 hmwgsqcv2.tar.bz2

File (Entity type)

A 5.54 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 159268001 tongue dorsum

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_159268001_tongue_dorsum" collection) w...

SRS078733.rapsearch2.m8

File (Entity type)

A 767 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgc2 tongue dorsum

Collection (Entity type)

Non-redundant catalog of bacterial genes in tongue dorsum that was generated by clustering the coass...

hmgi2 SRS078733

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS078733 sa...

SRS078733.tar.bz2

File (Entity type)

A 11.0 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS078733.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 8.37 GB file from HMP produced from OBI:0002623 as part of the HHS project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.