DataKnowledgeCloudtrainingcoordination

BS 41R3Z7G7 (Biosample)

Subject:

PT RX9TJGXB

Subject (Entity type)

Project:

SD YGVA0E1C

Project (Entity type)

Dcc Asset:

2026Q3 C2M2 datapackage.zip

Processed File (Entity type)

Dcc:

Kids First

DCC (Entity type)

Collection:

BS 41R3Z7G7

Collection (Entity type)

Anatomy:

proximal epiphysis of tibia

Anatomy (Entity type)

Creation Time:2022-10-31 16:14:36.163689

Results found

Linked to

	Label	Description
	PT RX9TJGXB Subject (Entity type)	A subject produced as part of the SD YGVA0E1C project
	70ae860d-1052-4f65-b1cf-919dd2e63191.consensus somatic.norm.annot.protected.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	8ccf1e95-e097-4e47-9f1d-dbbc08fb39c3.mutect2 somatic.norm.annot.public.vcf.gz.tbi File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872 amplicon1 cycles.txt File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872.metrics.txt File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872.controlfreec.ratio.png File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872.normal.gatk cnv.denoised.png File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872.mutect2 somatic.norm.annot.protected.maf File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872.mutect2 filtered.vcf.gz File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project
	2cc46335-e42c-4658-9b5c-54c1356c1872.strelka2 somatic.norm.annot.protected.maf File (Entity type)	A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

Subject

PT RX9TJGXB

Subject (Entity type)

A subject produced as part of the SD YGVA0E1C project

File

70ae860d-1052-4f65-b1cf-919dd2e63191.consensus somatic.norm.annot.protected.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

8ccf1e95-e097-4e47-9f1d-dbbc08fb39c3.mutect2 somatic.norm.annot.public.vcf.gz.tbi

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872 amplicon1 cycles.txt

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872.metrics.txt

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872.controlfreec.ratio.png

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872.normal.gatk cnv.denoised.png

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872.mutect2 somatic.norm.annot.protected.maf

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872.mutect2 filtered.vcf.gz

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

File

2cc46335-e42c-4658-9b5c-54c1356c1872.strelka2 somatic.norm.annot.protected.maf

File (Entity type)

A file from Kids First produced from OBI:0002117 as part of the SD YGVA0E1C project

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Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.