SRS142521 (Biosample)

Subject:

HHS 765013792

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

posterior fornix of vagina

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS142521.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 193 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgi2 765013792 posterior fornix Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_765013792_posterior_fornix" collection...
	hmasm2 SRS142521 Collection (Entity type)	Contigs assembled from sequence reads of SRS142521 sample using IDBA-UD
	hmcgc2-posterior fornix-0.90-centroids.fa.bz2 File (Entity type)	A 89.6 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS142521.gff3.bz2 File (Entity type)	A 405 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS142521.fna.bz2 File (Entity type)	A 1.64 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmwgsqcv2 SRS142521 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS142521 sample to SRA whe...
	SRS142521.rapsearch2.m8 File (Entity type)	A 26.9 MB file from HMP produced from OBI:0002623 as part of the HHS project
	765013792.pf.gff3.bz2 File (Entity type)	A 1.10 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc2 posterior fornix Collection (Entity type)	This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

SRS142521.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 193 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 765013792 posterior fornix

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_765013792_posterior_fornix" collection...

hmasm2 SRS142521

Collection (Entity type)

Contigs assembled from sequence reads of SRS142521 sample using IDBA-UD

hmcgc2-posterior fornix-0.90-centroids.fa.bz2

File (Entity type)

A 89.6 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS142521.gff3.bz2

File (Entity type)

A 405 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS142521.fna.bz2

File (Entity type)

A 1.64 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmwgsqcv2 SRS142521

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS142521 sample to SRA whe...

SRS142521.rapsearch2.m8

File (Entity type)

A 26.9 MB file from HMP produced from OBI:0002623 as part of the HHS project

765013792.pf.gff3.bz2

File (Entity type)

A 1.10 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc2 posterior fornix

Collection (Entity type)

This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.