SRS147057 (Biosample)

Subject:

HHS 868454789

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmrac2 SRS147057 Collection (Entity type)	Reads from SRS147057 sample are aligned to its assembled contigs.
	SRS147057 hmrac2.tar.bz2 File (Entity type)	A 5.93 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcasm2 868454789 supragingival plaque Collection (Entity type)	Quality trimmed reads generated from supragingival_plaque samples from HHS_868454789 host across mul...
	868454789.spp.gff3.bz2 File (Entity type)	A 12.1 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS147057.tar.bz2 File (Entity type)	A 9.74 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS147057 Collection (Entity type)	Contigs assembled from sequence reads of SRS147057 sample using IDBA-UD
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	868454789.spp.tar.bz2 File (Entity type)	A 564 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS147057.rapsearch2.m8 File (Entity type)	A 341 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgc2-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 451 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmrac2 SRS147057

Collection (Entity type)

Reads from SRS147057 sample are aligned to its assembled contigs.

SRS147057 hmrac2.tar.bz2

File (Entity type)

A 5.93 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmcasm2 868454789 supragingival plaque

Collection (Entity type)

Quality trimmed reads generated from supragingival_plaque samples from HHS_868454789 host across mul...

868454789.spp.gff3.bz2

File (Entity type)

A 12.1 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS147057.tar.bz2

File (Entity type)

A 9.74 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS147057

Collection (Entity type)

Contigs assembled from sequence reads of SRS147057 sample using IDBA-UD

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

868454789.spp.tar.bz2

File (Entity type)

A 564 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS147057.rapsearch2.m8

File (Entity type)

A 341 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgc2-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 451 MB file from HMP produced from OBI:0002623 as part of the HHS project

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.