SRS104519 (Biosample)

Subject:

HHS 763719065

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmgi2 SRS104519 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS104519 sa...
	SRS104519.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 9.56 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrac2 SRS104519 Collection (Entity type)	Reads from SRS104519 sample are aligned to its assembled contigs.
	hmrarg2 SRS104519 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS104519 sample to MetaRef reference gen...
	hmasm2 SRS104519 Collection (Entity type)	Contigs assembled from sequence reads of SRS104519 sample using IDBA-UD
	SRS104519.gff3.bz2 File (Entity type)	A 13.0 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmwgsqcv2 SRS104519 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS104519 sample to SRA whe...
	SRS104519.tar.bz2 File (Entity type)	A 19.8 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRR170303.fastq File (Entity type)	A 5.01 MB file from HMP produced from OBI:0002763 as part of the HHS project

hmgi2 SRS104519

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS104519 sa...

SRS104519.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 9.56 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmrac2 SRS104519

Collection (Entity type)

Reads from SRS104519 sample are aligned to its assembled contigs.

hmrarg2 SRS104519

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS104519 sample to MetaRef reference gen...

hmasm2 SRS104519

Collection (Entity type)

Contigs assembled from sequence reads of SRS104519 sample using IDBA-UD

SRS104519.gff3.bz2

File (Entity type)

A 13.0 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmwgsqcv2 SRS104519

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS104519 sample to SRA whe...

SRS104519.tar.bz2

File (Entity type)

A 19.8 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRR170303.fastq

File (Entity type)

A 5.01 MB file from HMP produced from OBI:0002763 as part of the HHS project

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.