SRS893355 (Biosample)

Subject:

HHS 182518224

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmcgi2 182518224 supragingival plaque Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_182518224_supragingival_plaque" collec...
	182518224.spp.fna.bz2 File (Entity type)	A 45.8 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS893355.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 1.65 GB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS893355.fna.bz2 File (Entity type)	A 36.9 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS893355 Collection (Entity type)	Contigs assembled from sequence reads of SRS893355 sample using IDBA-UD
	hmrarg2 SRS893355 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS893355 sample to MetaRef reference gen...
	hmcasm2 182518224 supragingival plaque Collection (Entity type)	Quality trimmed reads generated from supragingival_plaque samples from HHS_182518224 host across mul...
	SRS893355.rapsearch2.m8 File (Entity type)	A 587 MB file from HMP produced from OBI:0002623 as part of the HHS project
	182518224.spp.tar.bz2 File (Entity type)	A 657 KB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 182518224 supragingival plaque

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_182518224_supragingival_plaque" collec...

182518224.spp.fna.bz2

File (Entity type)

A 45.8 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS893355.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 1.65 GB file from HMP produced from OBI:0002623 as part of the HHS project

SRS893355.fna.bz2

File (Entity type)

A 36.9 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS893355

Collection (Entity type)

Contigs assembled from sequence reads of SRS893355 sample using IDBA-UD

hmrarg2 SRS893355

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS893355 sample to MetaRef reference gen...

hmcasm2 182518224 supragingival plaque

Collection (Entity type)

Quality trimmed reads generated from supragingival_plaque samples from HHS_182518224 host across mul...

SRS893355.rapsearch2.m8

File (Entity type)

A 587 MB file from HMP produced from OBI:0002623 as part of the HHS project

182518224.spp.tar.bz2

File (Entity type)

A 657 KB file from HMP produced from OBI:0002623 as part of the HHS project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.