SRS1041142 (Biosample)

Subject:

HHS 650853796

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

feces

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmgc2 stool Collection (Entity type)	This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...
	hmasm2 SRS1041142 Collection (Entity type)	Contigs assembled from sequence reads of SRS1041142 sample using IDBA-UD
	SRS1041142.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 1.90 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrac2 SRS1041142 Collection (Entity type)	Reads from SRS1041142 sample are aligned to its assembled contigs.
	hmcgc2 stool Collection (Entity type)	Non-redundant catalog of bacterial genes in stool that was generated by clustering the coassembled g...
	SRS1041142.fna.bz2 File (Entity type)	A 28.7 MB file from HMP produced from OBI:0002623 as part of the HHS project
	650853796.st.gff3.bz2 File (Entity type)	A 9.31 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgi2 650853796 stool Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_650853796_stool" collection) was perfo...
	650853796.st.tar.bz2 File (Entity type)	A 320 KB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS1041142.rapsearch2.m8 File (Entity type)	A 379 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc2 stool

Collection (Entity type)

This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

hmasm2 SRS1041142

Collection (Entity type)

Contigs assembled from sequence reads of SRS1041142 sample using IDBA-UD

SRS1041142.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 1.90 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmrac2 SRS1041142

Collection (Entity type)

Reads from SRS1041142 sample are aligned to its assembled contigs.

hmcgc2 stool

Collection (Entity type)

Non-redundant catalog of bacterial genes in stool that was generated by clustering the coassembled g...

SRS1041142.fna.bz2

File (Entity type)

A 28.7 MB file from HMP produced from OBI:0002623 as part of the HHS project

650853796.st.gff3.bz2

File (Entity type)

A 9.31 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 650853796 stool

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_650853796_stool" collection) was perfo...

650853796.st.tar.bz2

File (Entity type)

A 320 KB file from HMP produced from OBI:0002623 as part of the HHS project

SRS1041142.rapsearch2.m8

File (Entity type)

A 379 MB file from HMP produced from OBI:0002623 as part of the HHS project

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.