SRS046623 (Biosample)

Subject:

HHS 604812005

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

buccal mucosa

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmgi1 buccal mucosa Collection (Entity type)	The collection contains gene index files generated by running gene predictions and annotations on as...
	metacyc enzyme.combined md.txt.bz2 File (Entity type)	A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project
	buccal mucosa nr nuc.fasta.bz2 File (Entity type)	A 120 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgi2 604812005 buccal mucosa Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_604812005_buccal_mucosa" collection) w...
	hmrarg2 SRS046623 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS046623 sample to MetaRef reference gen...
	Synthetic gene clusters md.txt.bz2 File (Entity type)	A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc2 buccal mucosa Collection (Entity type)	This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...
	hmgi1 Collection (Entity type)	Gene Index: The collection contains gene index files generated by running gene predictions and annot...
	hmgoi1 carbohydrate active enzymes Collection (Entity type)	Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...
	hmgc1 buccal mucosa Collection (Entity type)	This collection contains a non-redundant catalog of bacterial genes from buccal_mucosa samples. This...

hmgi1 buccal mucosa

Collection (Entity type)

The collection contains gene index files generated by running gene predictions and annotations on as...

metacyc enzyme.combined md.txt.bz2

File (Entity type)

A 281 MB file from HMP produced from OBI:0002623 as part of the HHS project

buccal mucosa nr nuc.fasta.bz2

File (Entity type)

A 120 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 604812005 buccal mucosa

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_604812005_buccal_mucosa" collection) w...

hmrarg2 SRS046623

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS046623 sample to MetaRef reference gen...

Synthetic gene clusters md.txt.bz2

File (Entity type)

A 367 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc2 buccal mucosa

Collection (Entity type)

This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from...

hmgi1

Collection (Entity type)

Gene Index: The collection contains gene index files generated by running gene predictions and annot...

hmgoi1 carbohydrate active enzymes

Collection (Entity type)

Concatenated gene abundance summary file containing all sample output for carbohydrate_active_enzyme...

hmgc1 buccal mucosa

Collection (Entity type)

This collection contains a non-redundant catalog of bacterial genes from buccal_mucosa samples. This...

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.