SRS893339 (Biosample)

Subject:

HHS 182518224

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	hmcgi2 182518224 supragingival plaque Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_182518224_supragingival_plaque" collec...
	hmwgsqcv2 SRS893339 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS893339 sample to SRA whe...
	hmasm2 SRS893339 Collection (Entity type)	Contigs assembled from sequence reads of SRS893339 sample using IDBA-UD
	hmgi2 SRS893339 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS893339 sa...
	SRS893339 hmrac2.tar.bz2 File (Entity type)	A 1.36 GB file from HMP produced from OBI:0002623 as part of the HHS project
	182518224.spp.fna.bz2 File (Entity type)	A 45.8 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrarg2 SRS893339 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS893339 sample to MetaRef reference gen...
	SRS893339 hmwgsqcv2.tar.bz2 File (Entity type)	A 772 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS893339.gff3.bz2 File (Entity type)	A 4.81 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 182518224 supragingival plaque

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_182518224_supragingival_plaque" collec...

hmwgsqcv2 SRS893339

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS893339 sample to SRA whe...

hmasm2 SRS893339

Collection (Entity type)

Contigs assembled from sequence reads of SRS893339 sample using IDBA-UD

hmgi2 SRS893339

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS893339 sa...

SRS893339 hmrac2.tar.bz2

File (Entity type)

A 1.36 GB file from HMP produced from OBI:0002623 as part of the HHS project

182518224.spp.fna.bz2

File (Entity type)

A 45.8 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmrarg2 SRS893339

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS893339 sample to MetaRef reference gen...

SRS893339 hmwgsqcv2.tar.bz2

File (Entity type)

A 772 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS893339.gff3.bz2

File (Entity type)

A 4.81 MB file from HMP produced from OBI:0002623 as part of the HHS project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.