SRS143036 (Biosample)

Subject:

HHS 739574095

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

subgingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS143036.fna.bz2 File (Entity type)	A 16.0 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS143036.gff3.bz2 File (Entity type)	A 3.97 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrac2 SRS143036 Collection (Entity type)	Reads from SRS143036 sample are aligned to its assembled contigs.
	hmgi2 SRS143036 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS143036 sa...
	HHS 739574095 Subject (Entity type)	A subject produced as part of the HHS project
	hmasm2 SRS143036 Collection (Entity type)	Contigs assembled from sequence reads of SRS143036 sample using IDBA-UD
	SRS143036 hmwgsqcv2.tar.bz2 File (Entity type)	A 8.00 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc-subgingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 104 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRR170897.fastq File (Entity type)	A 7.95 MB file from HMP produced from OBI:0002763 as part of the HHS project
	SRS143036.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 788 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS143036.fna.bz2

File (Entity type)

A 16.0 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS143036.gff3.bz2

File (Entity type)

A 3.97 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmrac2 SRS143036

Collection (Entity type)

Reads from SRS143036 sample are aligned to its assembled contigs.

hmgi2 SRS143036

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS143036 sa...

HHS 739574095

Subject (Entity type)

A subject produced as part of the HHS project

hmasm2 SRS143036

Collection (Entity type)

Contigs assembled from sequence reads of SRS143036 sample using IDBA-UD

SRS143036 hmwgsqcv2.tar.bz2

File (Entity type)

A 8.00 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc-subgingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 104 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRR170897.fastq

File (Entity type)

A 7.95 MB file from HMP produced from OBI:0002763 as part of the HHS project

SRS143036.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 788 MB file from HMP produced from OBI:0002623 as part of the HHS project

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CFDE Workbench

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.