DataKnowledgeCloudtrainingcoordination

EXR-TPATE1BNB4Cy-BS (Biosample)

Subject:

EXR-TPATE1S7fDyD-DO

Subject (Entity type)

Sample Prep Method:

sample preparation for sequencing assay

Sample Prep Method (Entity type)

Project:

EXR-TPATE168zlfJ-ST

Project (Entity type)

Disease:

liver disease

Disease (Entity type)

Dcc Asset:

exRNA CFDE 102025.zip

Processed File (Entity type)

Dcc:

ExRNA

DCC (Entity type)

Collection:

EXR-TPATE1NUsA7E-AN

Collection (Entity type)

Biofluid:

bile

Biofluid (Entity type)

Anatomy:

bile duct

Anatomy (Entity type)

Creation Time:2015-07-08 00:00:00.000000

Results found

Linked to

	Label	Description
	liver disease Disease (Entity type)	A Disease
	EXR-TPATE1NUsA7E-AN Collection (Entity type)	Analysis Entry
	EXR-TPATE1S7fDyD-DO Subject (Entity type)	A subject produced as part of the exRNA Atlas project
	endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project
	endogenousAlignments genome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project
	endogenousAlignments genomeMapped transcriptome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project
	endogenousAlignments genome Aligned.bedgraph.intersect RBP all combined.bed.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project
	filteringAlignments rRNA Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project
	readCounts miRNAmature sense.txt File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project
	readCounts gencode sense.txt File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

Disease

liver disease

Disease (Entity type)

A Disease

Collection

EXR-TPATE1NUsA7E-AN

Collection (Entity type)

Analysis Entry

Subject

EXR-TPATE1S7fDyD-DO

Subject (Entity type)

A subject produced as part of the exRNA Atlas project

File

endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

File

endogenousAlignments genome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

File

endogenousAlignments genomeMapped transcriptome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

File

endogenousAlignments genome Aligned.bedgraph.intersect RBP all combined.bed.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

File

filteringAlignments rRNA Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

File

readCounts miRNAmature sense.txt

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

File

readCounts gencode sense.txt

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR TPATE168zlfJ ST project

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

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