SRS019176 (Biosample)

Subject:

HHS 765398164

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS019176.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 1.79 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrarg2 SRS019176 Collection (Entity type)	Unaligned raw reads resulting from alignment of reads from SRS019176 sample to MetaRef reference gen...
	765398164.spp.gff3.bz2 File (Entity type)	A 11.8 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS019176.gff3.bz2 File (Entity type)	A 6.68 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS019176 Collection (Entity type)	Contigs assembled from sequence reads of SRS019176 sample using IDBA-UD
	hmwgsqcv2 SRS019176 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS019176 sample to SRA whe...
	SRS019176.rapsearch2.m8 File (Entity type)	A 441 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgi2 SRS019176 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS019176 sa...
	hmcgc2-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 451 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS019176.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 1.79 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmrarg2 SRS019176

Collection (Entity type)

Unaligned raw reads resulting from alignment of reads from SRS019176 sample to MetaRef reference gen...

765398164.spp.gff3.bz2

File (Entity type)

A 11.8 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS019176.gff3.bz2

File (Entity type)

A 6.68 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS019176

Collection (Entity type)

Contigs assembled from sequence reads of SRS019176 sample using IDBA-UD

hmwgsqcv2 SRS019176

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS019176 sample to SRA whe...

SRS019176.rapsearch2.m8

File (Entity type)

A 441 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgi2 SRS019176

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS019176 sa...

hmcgc2-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 451 MB file from HMP produced from OBI:0002623 as part of the HHS project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.