SRS149334 (Biosample)

Subject:

HHS 612472597

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	612472597.spp.gff3.bz2 File (Entity type)	A 12.3 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgi2 612472597 supragingival plaque Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_612472597_supragingival_plaque" collec...
	SRS149334.tar.bz2 File (Entity type)	A 16.3 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS149334 Collection (Entity type)	Contigs assembled from sequence reads of SRS149334 sample using IDBA-UD
	SRS149334.gff3.bz2 File (Entity type)	A 6.93 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmrac2 SRS149334 Collection (Entity type)	Reads from SRS149334 sample are aligned to its assembled contigs.
	hmcasm2 612472597 supragingival plaque Collection (Entity type)	Quality trimmed reads generated from supragingival_plaque samples from HHS_612472597 host across mul...
	SRS149334 hmwgsqcv2.tar.bz2 File (Entity type)	A 3.02 GB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS149334.rapsearch2.m8 File (Entity type)	A 475 MB file from HMP produced from OBI:0002623 as part of the HHS project

612472597.spp.gff3.bz2

File (Entity type)

A 12.3 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 612472597 supragingival plaque

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_612472597_supragingival_plaque" collec...

SRS149334.tar.bz2

File (Entity type)

A 16.3 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS149334

Collection (Entity type)

Contigs assembled from sequence reads of SRS149334 sample using IDBA-UD

SRS149334.gff3.bz2

File (Entity type)

A 6.93 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmrac2 SRS149334

Collection (Entity type)

Reads from SRS149334 sample are aligned to its assembled contigs.

hmcasm2 612472597 supragingival plaque

Collection (Entity type)

Quality trimmed reads generated from supragingival_plaque samples from HHS_612472597 host across mul...

SRS149334 hmwgsqcv2.tar.bz2

File (Entity type)

A 3.02 GB file from HMP produced from OBI:0002623 as part of the HHS project

SRS149334.rapsearch2.m8

File (Entity type)

A 475 MB file from HMP produced from OBI:0002623 as part of the HHS project

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.