SRS893325 (Biosample)

Subject:

HHS 316129862

Subject (Entity type)

Project:

HHS

Project (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Anatomy:

supragingival dental plaque

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	SRS893325 hmrac2.tar.bz2 File (Entity type)	A 1.97 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcasm2 316129862 supragingival plaque Collection (Entity type)	Quality trimmed reads generated from supragingival_plaque samples from HHS_316129862 host across mul...
	SRS893325.gff3.bz2 File (Entity type)	A 6.02 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmwgsqcv2 SRS893325 Collection (Entity type)	QC and Merged reads: Sequencing center deposited metagenome sequence for SRS893325 sample to SRA whe...
	SRS893325.MetaRef-unaligned reads.fastq.tar.bz2 File (Entity type)	A 1.08 GB file from HMP produced from OBI:0002623 as part of the HHS project
	hmasm2 SRS893325 Collection (Entity type)	Contigs assembled from sequence reads of SRS893325 sample using IDBA-UD
	hmgi2 SRS893325 Collection (Entity type)	This collection contains structural and functional annotations of assembled contigs for SRS893325 sa...
	hmgc-supragingival plaque-0.90-centroids.fa.bz2 File (Entity type)	A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project
	SRS893325.rapsearch2.m8 File (Entity type)	A 406 MB file from HMP produced from OBI:0002623 as part of the HHS project
	hmcgi2 316129862 supragingival plaque Collection (Entity type)	Structural annotation of co-assembled contigs (refer "hmcasm2_316129862_supragingival_plaque" collec...

SRS893325 hmrac2.tar.bz2

File (Entity type)

A 1.97 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmcasm2 316129862 supragingival plaque

Collection (Entity type)

Quality trimmed reads generated from supragingival_plaque samples from HHS_316129862 host across mul...

SRS893325.gff3.bz2

File (Entity type)

A 6.02 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmwgsqcv2 SRS893325

Collection (Entity type)

QC and Merged reads: Sequencing center deposited metagenome sequence for SRS893325 sample to SRA whe...

SRS893325.MetaRef-unaligned reads.fastq.tar.bz2

File (Entity type)

A 1.08 GB file from HMP produced from OBI:0002623 as part of the HHS project

hmasm2 SRS893325

Collection (Entity type)

Contigs assembled from sequence reads of SRS893325 sample using IDBA-UD

hmgi2 SRS893325

Collection (Entity type)

This collection contains structural and functional annotations of assembled contigs for SRS893325 sa...

hmgc-supragingival plaque-0.90-centroids.fa.bz2

File (Entity type)

A 627 MB file from HMP produced from OBI:0002623 as part of the HHS project

SRS893325.rapsearch2.m8

File (Entity type)

A 406 MB file from HMP produced from OBI:0002623 as part of the HHS project

hmcgi2 316129862 supragingival plaque

Collection (Entity type)

Structural annotation of co-assembled contigs (refer "hmcasm2_316129862_supragingival_plaque" collec...

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.