landmark transcript profiling assay (Assay Type)

Synonyms:L1000 mRNA profiling assay

Description:A type of transcription profiling assay in which a set of landmark transcripts that have been determined to provide a comprehensive profile of cell activity, plus numerous steady-state controls, are assayed via ligation-mediated amplification followed by capture on fluorescently labeled microspheres followed by detection of fluorescence.

Results found

Linked to

	Label	Description
	L1000 LINCS DCIC PBIOA020 HCC515 24H G06 BRD-K21448636 0.04uM.tsv.gz File (Entity type)	A 296 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project
	L1000 LINCS DCIC KDB008 A549 96H C22 TIPARP.tsv.gz File (Entity type)	A 215 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project
	L1000 LINCS DCIC CYT001 A375 4h INHBA 10ng per ml.tsv.gz File (Entity type)	A 295 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project
	L1000 LINCS DCIC DOSVAL006 MCF7 24H K07 mitoxantrone 20uM.tsv.gz File (Entity type)	A 167 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project
	L1000 LINCS DCIC REP.A006 MCF7 24H E02 vernakalant 3.33um.tsv.gz File (Entity type)	A 161 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase2 project
	LINCS L1000 Chemical BRD-K10987837 mean sig.tsv.gz File (Entity type)	A 87.9 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 Consensus project
	L1000 LINCS DCIC MOAR009 A204 24H K02 tariquidar 3.33uM.tsv.gz File (Entity type)	A 89.2 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project
	LINCS L1000 Chemical BRD-K20211345 mean sig.tsv.gz File (Entity type)	A 98.8 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 Consensus project
	L1000 LINCS DCIC CPC004 PC3 24H E09 dehydrocholate 10.00um.tsv.gz File (Entity type)	A 450 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project
	LINCS L1000 Chemical rivastigmine mean sig.tsv.gz File (Entity type)	A 101 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 Consensus project

L1000 LINCS DCIC PBIOA020 HCC515 24H G06 BRD-K21448636 0.04uM.tsv.gz

File (Entity type)

A 296 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

L1000 LINCS DCIC KDB008 A549 96H C22 TIPARP.tsv.gz

File (Entity type)

A 215 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

L1000 LINCS DCIC CYT001 A375 4h INHBA 10ng per ml.tsv.gz

File (Entity type)

A 295 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

L1000 LINCS DCIC DOSVAL006 MCF7 24H K07 mitoxantrone 20uM.tsv.gz

File (Entity type)

A 167 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

L1000 LINCS DCIC REP.A006 MCF7 24H E02 vernakalant 3.33um.tsv.gz

File (Entity type)

A 161 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase2 project

LINCS L1000 Chemical BRD-K10987837 mean sig.tsv.gz

File (Entity type)

A 87.9 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 Consensus project

L1000 LINCS DCIC MOAR009 A204 24H K02 tariquidar 3.33uM.tsv.gz

File (Entity type)

A 89.2 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

LINCS L1000 Chemical BRD-K20211345 mean sig.tsv.gz

File (Entity type)

A 98.8 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 Consensus project

L1000 LINCS DCIC CPC004 PC3 24H E09 dehydrocholate 10.00um.tsv.gz

File (Entity type)

A 450 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

LINCS L1000 Chemical rivastigmine mean sig.tsv.gz

File (Entity type)

A 101 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 Consensus project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

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