small RNA sequencing assay (Analysis Type)

Synonyms:short RNA-seq, small RNA-seq

Description:An RNA-seq assay which is targeting small RNA (< 200 bp) sequences such as, but not exclusive to, miRNAs using, for example, small RNA library preparation kits.

Results found

Linked to

	Label	Description
	endogenousAlignments genome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1aSAHPR ST project
	endogenousAlignments genome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR JFRAN1RCOFF1COLNCANC ST project
	endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1MJFPDD ST project
	filteringAlignments rRNA Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR DWONG1TMDW78D ST project
	readCounts gencode antisense.txt File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR KWITW1LIPOPROTEINS ST project
	filteringAlignments rRNA Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR AWEAV1COLNCANC ST project
	endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR DWONG1TMDW78D ST project
	endogenousAlignments genome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1aSAHPR ST project
	endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR JFREE1UH2PLASMA1 ST project
	endogenousAlignments genomeMapped transcriptome Aligned.bedgraph.xz File (Entity type)	A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1aSAHPR ST project

endogenousAlignments genome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1aSAHPR ST project

endogenousAlignments genome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR JFRAN1RCOFF1COLNCANC ST project

endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1MJFPDD ST project

filteringAlignments rRNA Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR DWONG1TMDW78D ST project

readCounts gencode antisense.txt

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR KWITW1LIPOPROTEINS ST project

filteringAlignments rRNA Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR AWEAV1COLNCANC ST project

endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR DWONG1TMDW78D ST project

endogenousAlignments genome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1aSAHPR ST project

endogenousAlignments genomeUnmapped transcriptome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR JFREE1UH2PLASMA1 ST project

endogenousAlignments genomeMapped transcriptome Aligned.bedgraph.xz

File (Entity type)

A file from ExRNA produced from OBI:0002112 as part of the EXR KJENS1aSAHPR ST project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.