FEATURED
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
Given RNA-seq samples from a patient tumor, we screen for targets which are highly expressed in the tumor but lowly expressed across all healthy human tissues in GTEx. Detailed information about the selected target are queried from several DCCs.
FEATURED
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
Given RNA-seq samples from a patient tumor, we screen for targets which are highly expressed in the tumor but lowly expressed across all healthy human tissues in GTEx. Detailed information about the selected target are queried from several DCCs.
FEATURED
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
Given RNA-seq samples from a patient tumor, we screen for targets which are highly expressed in the tumor but lowly expressed across all healthy human tissues in GTEx. Detailed information about the selected target are queried from several DCCs.
All Use Cases
Explore different use cases that utilizes data from different CFDE participating programs
Data Distillery Knowledge Graph
MW2Disease
For a specific disease in Metabolomics Workbench, find all IDG and GTEx assertions that may be related to the disease in a specific tissue type.
Data Distillery Knowledge Graph
Tissue2Drugs
Find all genes that are highly expressed in a GTEx tissue and may be perturbed by a specific compound based on data from the LINCS L1000 dataset, and are known drug targets based on data curated by IDG.
Playbook Workflow Builder
Identify the Tissue Activity for a TF based on its Targets
Given a Transcription Factor, we collect its targets by various resources and then Enrich the set of consensus targets against GTEx Tissue expression. The result is ranked tissues potentially regulated by the transcription factor.
ProKN
Common kinase pathways/complexes
Explore common pathways and complexes between kinases affected at the transcriptomics and phosphoproteomics levels by a perturbagen.
@CFDE Workbench 2026
The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
@CFDE Workbench 2026