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Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
FEATURED

Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets

Given RNA-seq samples from a patient tumor, we screen for targets which are highly expressed in the tumor but lowly expressed across all healthy human tissues in GTEx. Detailed information about the selected target are queried from several DCCs.
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
Mild Cognitive Impairment Use Case
FEATURED

Mild Cognitive Impairment Use Case

Find all IDG and GTEx assertions that may be related to mild cognitive impairment and any tissue type.
Mild Cognitive Impairment Use Case
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
FEATURED

Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets

Given RNA-seq samples from a patient tumor, we screen for targets which are highly expressed in the tumor but lowly expressed across all healthy human tissues in GTEx. Detailed information about the selected target are queried from several DCCs.
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
Mild Cognitive Impairment Use Case
FEATURED

Mild Cognitive Impairment Use Case

Find all IDG and GTEx assertions that may be related to mild cognitive impairment and any tissue type.
Mild Cognitive Impairment Use Case
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
FEATURED

Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets

Given RNA-seq samples from a patient tumor, we screen for targets which are highly expressed in the tumor but lowly expressed across all healthy human tissues in GTEx. Detailed information about the selected target are queried from several DCCs.
Cell Surface Targets for Individual Cancer Patients Analyzed with Common Fund Datasets
Mild Cognitive Impairment Use Case
FEATURED

Mild Cognitive Impairment Use Case

Find all IDG and GTEx assertions that may be related to mild cognitive impairment and any tissue type.
Mild Cognitive Impairment Use Case

All Use Cases

Explore different use cases that utilizes data from different CFDE participating programs
transcription factor (1)
tissue (1)
Identify the Tissue Activity for a TF based on its Targets
Playbook Workflow Builder

Identify the Tissue Activity for a TF based on its Targets

Given a Transcription Factor, we collect its targets by various resources and then Enrich the set of consensus targets against GTEx Tissue expression. The result is ranked tissues potentially regulated by the transcription factor.
Identify the Tissue Activity for a TF based on its Targets
transcription factor
tissue
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@CFDE Workbench 2026
The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
Consortium
About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
Community
Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
Resources
Data & MetadataToolsChatbotUse CasesPublications
CFDE Workbench
Report a bug
The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
@CFDE Workbench 2026
This repository is under review for potential modification in compliance with Administration directives.